IL_4V7L_395

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCG*CGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary: CCG,CGG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7L_395 not in the Motif Atlas

Geometric match to IL_7RQB_034

Geometric discrepancy: 0.1477

The information below is about IL_7RQB_034

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_86319.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

270

Unit IDs

4V7L|1|DA|C|2840
4V7L|1|DA|C|2841
4V7L|1|DA|G|2842
*
4V7L|1|DA|C|2875
4V7L|1|DA|G|2876
4V7L|1|DA|G|2877

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DE

50S ribosomal protein L3

Chain DR

50S ribosomal protein L17

Chain DT

50S ribosomal protein L19