3D structure

PDB id
4V7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structures of viomycin bound to the 70S ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CCAUCAG*CGACGACGG
Length
16 nucleotides
Bulged bases
4V7L|1|CA|U|244, 4V7L|1|CA|C|280
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7L|1|CA|C|241
4V7L|1|CA|C|242
4V7L|1|CA|A|243
4V7L|1|CA|U|244
4V7L|1|CA|C|245
4V7L|1|CA|A|246
4V7L|1|CA|G|247
*
4V7L|1|CA|C|277
4V7L|1|CA|G|278
4V7L|1|CA|A|279
4V7L|1|CA|C|280
4V7L|1|CA|G|281
4V7L|1|CA|A|282
4V7L|1|CA|C|283
4V7L|1|CA|G|284
4V7L|1|CA|G|285

Current chains

Chain CA
16S ribosomal RNA

Nearby chains

Chain CL
30S ribosomal protein S12
Chain CQ
30S ribosomal protein S17

Coloring options:

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