IL_4V7L_433
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGUC*GAUACG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7L_433 not in the Motif Atlas
- Geometric match to IL_8P9A_467
- Geometric discrepancy: 0.3925
- The information below is about IL_8P9A_467
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_07469.2
- Basepair signature
- cWW-tSH-cWW-cSH-R-cWW
- Number of instances in this motif group
- 3
Unit IDs
4V7L|1|CA|C|596
4V7L|1|CA|G|597
4V7L|1|CA|U|598
4V7L|1|CA|C|599
*
4V7L|1|CA|G|639
4V7L|1|CA|A|640
4V7L|1|CA|U|641
4V7L|1|CA|A|642
4V7L|1|CA|C|643
4V7L|1|CA|G|644
Current chains
- Chain CA
- 16S ribosomal RNA
Nearby chains
- Chain CH
- 30S ribosomal protein S8
- Chain CQ
- 30S ribosomal protein S17
Coloring options: