IL_4V7L_452

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGCCCCCAAGUC*GCGCC

Length

17 nucleotides

Bulged bases

4V7L|1|DA|U|1012

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7L|1|DA|G|1002
4V7L|1|DA|G|1003
4V7L|1|DA|C|1004
4V7L|1|DA|C|1005
4V7L|1|DA|C|1006
4V7L|1|DA|C|1007
4V7L|1|DA|C|1008
4V7L|1|DA|A|1009
4V7L|1|DA|A|1010
4V7L|1|DA|G|1011
4V7L|1|DA|U|1012
4V7L|1|DA|C|1013
*
4V7L|1|DA|G|1149
4V7L|1|DA|C|1150
4V7L|1|DA|G|1151
4V7L|1|DA|C|1152
4V7L|1|DA|C|1153

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DB

5S ribosomal RNA; 5S rRNA

Chain DN

50S ribosomal protein L13

Chain DU

50S ribosomal protein L20