IL_4V7L_453
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAUGAAGGC*GCUGGAG
- Length
- 17 nucleotides
- Bulged bases
- 4V7L|1|DA|U|1211
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7L_453 not in the Motif Atlas
- Geometric match to IL_4V88_508
- Geometric discrepancy: 0.3757
- The information below is about IL_4V88_508
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_99095.1
- Basepair signature
- cWW-tSS-L-tSH-L-R-R-R-L-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V7L|1|DA|C|1208
4V7L|1|DA|G|1209
4V7L|1|DA|A|1210
4V7L|1|DA|U|1211
4V7L|1|DA|G|1212
4V7L|1|DA|A|1213
4V7L|1|DA|A|1214
4V7L|1|DA|G|1215
4V7L|1|DA|G|1216
4V7L|1|DA|C|1217
*
4V7L|1|DA|G|1232
4V7L|1|DA|C|1233
4V7L|1|DA|U|1234
4V7L|1|DA|G|1235
4V7L|1|DA|G|1236
4V7L|1|DA|A|1237
4V7L|1|DA|G|1238
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain DU
- 50S ribosomal protein L20
Coloring options: