IL_4V7L_462
3D structure
- PDB id
- 4V7L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structures of viomycin bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AGG*CACCU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7L_462 not in the Motif Atlas
- Homologous match to IL_5J7L_335
- Geometric discrepancy: 0.2556
- The information below is about IL_5J7L_335
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V7L|1|DA|A|2453
4V7L|1|DA|G|2454
4V7L|1|DA|G|2455
*
4V7L|1|DA|C|2496
4V7L|1|DA|A|2497
4V7L|1|DA|C|2498
4V7L|1|DA|C|2499
4V7L|1|DA|U|2500
Current chains
- Chain DA
- 23S ribosomal RNA
Nearby chains
- Chain CW
- Transfer RNA; tRNA
- Chain D0
- 50S ribosomal protein L27
- Chain DE
- 50S ribosomal protein L3
- Chain DQ
- 50S ribosomal protein L16
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