IL_4V7L_463

3D structure

PDB id

4V7L (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structures of viomycin bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGAUCU*AGGUUUG

Length

13 nucleotides

Bulged bases

4V7L|1|DA|U|2491

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7L|1|DA|U|2457
4V7L|1|DA|G|2458
4V7L|1|DA|A|2459
4V7L|1|DA|U|2460
4V7L|1|DA|C|2461
4V7L|1|DA|U|2462
*
4V7L|1|DA|A|2488
4V7L|1|DA|G|2489
4V7L|1|DA|G|2490
4V7L|1|DA|U|2491
4V7L|1|DA|U|2492
4V7L|1|DA|U|2493
4V7L|1|DA|G|2494

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CW

Transfer RNA; tRNA

Chain D0

50S ribosomal protein L27

Chain DQ

50S ribosomal protein L16