3D structure

PDB id
4V7L (explore in PDB, NAKB, or RNA 3D Hub)
Description
The structures of viomycin bound to the 70S ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
UGGGAGCCUGUGAAC*GGGAGGCGCCGGUGAAAUACCA
Length
37 nucleotides
Bulged bases
4V7L|1|BA|U|2132
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7L|1|BA|U|2122
4V7L|1|BA|G|2123
4V7L|1|BA|G|2124
4V7L|1|BA|G|2125
4V7L|1|BA|A|2126
4V7L|1|BA|G|2127
4V7L|1|BA|C|2128
4V7L|1|BA|C|2129
4V7L|1|BA|U|2130
4V7L|1|BA|G|2131
4V7L|1|BA|U|2132
4V7L|1|BA|G|2133
4V7L|1|BA|A|2134
4V7L|1|BA|A|2135
4V7L|1|BA|C|2136
*
4V7L|1|BA|G|2155
4V7L|1|BA|G|2156
4V7L|1|BA|G|2157
4V7L|1|BA|A|2158
4V7L|1|BA|G|2159
4V7L|1|BA|G|2160
4V7L|1|BA|C|2161
4V7L|1|BA|G|2162
4V7L|1|BA|C|2163
4V7L|1|BA|C|2164
4V7L|1|BA|G|2165
4V7L|1|BA|G|2166
4V7L|1|BA|U|2167
4V7L|1|BA|G|2168
4V7L|1|BA|A|2169
4V7L|1|BA|A|2170
4V7L|1|BA|A|2171
4V7L|1|BA|U|2172
4V7L|1|BA|A|2173
4V7L|1|BA|C|2174
4V7L|1|BA|C|2175
4V7L|1|BA|A|2176

Current chains

Chain BA
23S ribosomal RNA

Nearby chains

Chain AY
Transfer RNA; tRNA
Chain BC
50S ribosomal protein L1

Coloring options:

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