IL_4V7P_107

3D structure

PDB id

4V7P (explore in PDB, NAKB, or RNA 3D Hub)

Description

Recognition of the amber stop codon by release factor RF1.

Experimental method

X-RAY DIFFRACTION

Resolution

3.62 Å

Loop

Sequence

CUAAGUG*CUUAG*G

Length

13 nucleotides

Bulged bases

4V7P|1|BA|U|1142, 4V7P|1|BA|A|1143

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7P|1|BA|C|1018
4V7P|1|BA|U|1019
4V7P|1|BA|A|1020
4V7P|1|BA|A|1021
4V7P|1|BA|G|1022
4V7P|1|BA|U|1023
4V7P|1|BA|G|1024
*
4V7P|1|BA|C|1140
4V7P|1|BA|U|1141
4V7P|1|BA|U|1142
4V7P|1|BA|A|1143
4V7P|1|BA|G|1144
*
4V7P|1|BA|G|1144

Current chains

Chain BA

23S ribosomal RNA

Nearby chains

Chain BG

50S ribosomal protein L6

Chain BJ

50S ribosomal protein L13