3D structure

PDB id
4V7S (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal structure of the E. coli ribosome bound to telithromycin.
Experimental method
X-RAY DIFFRACTION
Resolution
3.25 Å

Loop

Sequence
GCAAG*CAACC
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V7S_100 not in the Motif Atlas
Homologous match to IL_5J7L_274
Geometric discrepancy: 0.1519
The information below is about IL_5J7L_274
Detailed Annotation
Triple sheared
Broad Annotation
No text annotation
Motif group
IL_17948.2
Basepair signature
cWW-L-R-tSH-tHS-cWW
Number of instances in this motif group
13

Unit IDs

4V7S|1|BA|G|875
4V7S|1|BA|C|876
4V7S|1|BA|A|877
4V7S|1|BA|A|878
4V7S|1|BA|G|879
*
4V7S|1|BA|C|898
4V7S|1|BA|A|899
4V7S|1|BA|A|900
4V7S|1|BA|C|901
4V7S|1|BA|C|902

Current chains

Chain BA
23S rRNA

Nearby chains

Chain BM
50S ribosomal protein L16

Coloring options:


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