IL_4V7S_243

3D structure

PDB id

4V7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to telithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

GGC*GUC

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7S_243 not in the Motif Atlas

Geometric match to IL_4V88_444

Geometric discrepancy: 0.2345

The information below is about IL_4V88_444

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_44258.2

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

301

Unit IDs

4V7S|1|CA|G|1241
4V7S|1|CA|G|1242
4V7S|1|CA|C|1243
*
4V7S|1|CA|G|1294
4V7S|1|CA|U|1295
4V7S|1|CA|C|1296

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CG

30S ribosomal protein S7

Chain CM

30S ribosomal protein S13