IL_4V7S_260
3D structure
- PDB id
- 4V7S (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to telithromycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- GAG*CUCC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7S_260 not in the Motif Atlas
- Geometric match to IL_3PDR_004
- Geometric discrepancy: 0.3681
- The information below is about IL_3PDR_004
- Detailed Annotation
- Major groove platform with extra cWW
- Broad Annotation
- Major groove platform
- Motif group
- IL_51387.2
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 20
Unit IDs
4V7S|1|DA|G|43
4V7S|1|DA|A|44
4V7S|1|DA|G|45
*
4V7S|1|DA|C|433
4V7S|1|DA|U|434
4V7S|1|DA|C|435
4V7S|1|DA|C|436
Current chains
- Chain DA
- 23S rRNA
Nearby chains
No other chains within 10ÅColoring options: