IL_4V7S_266

3D structure

PDB id

4V7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to telithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

CCUGAAUC*GUGAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7S_266 not in the Motif Atlas

Homologous match to IL_5J7L_253

Geometric discrepancy: 0.3265

The information below is about IL_5J7L_253

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_77870.1

Basepair signature

cWW-L-R-L-tHS-L-cWW-L-cWW

Number of instances in this motif group

2

Unit IDs

4V7S|1|DA|C|274
4V7S|1|DA|C|275
4V7S|1|DA|U|276
4V7S|1|DA|G|277
4V7S|1|DA|A|278
4V7S|1|DA|A|279
4V7S|1|DA|U|280
4V7S|1|DA|C|281
*
4V7S|1|DA|G|359
4V7S|1|DA|U|360
4V7S|1|DA|G|361
4V7S|1|DA|A|362
4V7S|1|DA|G|363

Current chains

Chain DA

23S rRNA

Nearby chains