IL_4V7S_278

3D structure

PDB id

4V7S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to telithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.25 Å

Loop

Sequence

UGAAG*UGGAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7S_278 not in the Motif Atlas

Geometric match to IL_4WF9_024

Geometric discrepancy: 0.0919

The information below is about IL_4WF9_024

Detailed Annotation

Triple sheared

Broad Annotation

No text annotation

Motif group

IL_50730.2

Basepair signature

cWW-tSH-tHS-tHS-cWW

Number of instances in this motif group

19

Unit IDs

4V7S|1|DA|U|703
4V7S|1|DA|G|704
4V7S|1|DA|A|705
4V7S|1|DA|A|706
4V7S|1|DA|G|707
*
4V7S|1|DA|U|724
4V7S|1|DA|G|725
4V7S|1|DA|G|726
4V7S|1|DA|A|727
4V7S|1|DA|G|728

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DC

50S ribosomal protein L2