IL_4V7T_377

3D structure

PDB id

4V7T (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to chloramphenicol.

Experimental method

X-RAY DIFFRACTION

Resolution

3.19 Å

Loop

Sequence

UGCAAACA*UGGACGUAUA

Length

18 nucleotides

Bulged bases

4V7T|1|DA|A|1801, 4V7T|1|DA|C|1816, 4V7T|1|DA|U|1820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7T|1|DA|U|1798
4V7T|1|DA|G|1799
4V7T|1|DA|C|1800
4V7T|1|DA|A|1801
4V7T|1|DA|A|1802
4V7T|1|DA|A|1803
4V7T|1|DA|C|1804
4V7T|1|DA|A|1805
*
4V7T|1|DA|U|1812
4V7T|1|DA|G|1813
4V7T|1|DA|G|1814
4V7T|1|DA|A|1815
4V7T|1|DA|C|1816
4V7T|1|DA|G|1817
4V7T|1|DA|U|1818
4V7T|1|DA|A|1819
4V7T|1|DA|U|1820
4V7T|1|DA|A|1821

Current chains

Chain DA

23S rRNA

Nearby chains

Chain CA

Small subunit ribosomal RNA; SSU rRNA

Chain DC

50S ribosomal protein L2