IL_4V7V_336

3D structure

PDB id

4V7V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the E. coli ribosome bound to clindamycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.29 Å

Loop

Sequence

GCCUU*AAUGU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V7V|1|DA|G|2102
4V7V|1|DA|C|2103
4V7V|1|DA|C|2104
4V7V|1|DA|U|2105
4V7V|1|DA|U|2106
*
4V7V|1|DA|A|2183
4V7V|1|DA|A|2184
4V7V|1|DA|U|2185
4V7V|1|DA|G|2186
4V7V|1|DA|U|2187

Current chains

Chain DA

23S rRNA

Nearby chains

Chain DH

50S ribosomal protein L9