3D structure

PDB id
4V7W (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Thermus thermophilus ribosome complexed with chloramphenicol.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CUACAAAG*CAAAAAGG
Length
16 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7W|1|AA|C|1246
4V7W|1|AA|U|1247
4V7W|1|AA|A|1248
4V7W|1|AA|C|1249
4V7W|1|AA|A|1250
4V7W|1|AA|A|1251
4V7W|1|AA|A|1252
4V7W|1|AA|G|1253
*
4V7W|1|AA|C|1284
4V7W|1|AA|A|1285
4V7W|1|AA|A|1286
4V7W|1|AA|A|1287
4V7W|1|AA|A|1288
4V7W|1|AA|A|1289
4V7W|1|AA|G|1290
4V7W|1|AA|G|1291

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AG
30S ribosomal protein S7
Chain AI
30S ribosomal protein S9
Chain AJ
30S ribosomal protein S10
Chain AN
30S ribosomal protein S14
Chain AU
30S ribosomal protein Thx

Coloring options:

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