3D structure

PDB id
4V7X (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Thermus thermophilus ribosome complexed with erythromycin.
Experimental method
X-RAY DIFFRACTION
Resolution
3 Å

Loop

Sequence
CGC*GGACUGCCCGCGAAAGCGGGAGGAAGGAG
Length
32 nucleotides
Bulged bases
4V7X|1|CA|A|1183
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

4V7X|1|CA|C|1116
4V7X|1|CA|G|1117
4V7X|1|CA|C|1118
*
4V7X|1|CA|G|1155
4V7X|1|CA|G|1156
4V7X|1|CA|A|1157
4V7X|1|CA|C|1158
4V7X|1|CA|U|1159
4V7X|1|CA|G|1160
4V7X|1|CA|C|1161
4V7X|1|CA|C|1162
4V7X|1|CA|C|1163
4V7X|1|CA|G|1164
4V7X|1|CA|C|1165
4V7X|1|CA|G|1166
4V7X|1|CA|A|1168
4V7X|1|CA|A|1169
4V7X|1|CA|A|1170
4V7X|1|CA|G|1171
4V7X|1|CA|C|1172
4V7X|1|CA|G|1173
4V7X|1|CA|G|1174
4V7X|1|CA|G|1175
4V7X|1|CA|A|1176
4V7X|1|CA|G|1177
4V7X|1|CA|G|1178
4V7X|1|CA|A|1179
4V7X|1|CA|A|1180
4V7X|1|CA|G|1181
4V7X|1|CA|G|1182
4V7X|1|CA|A|1183
4V7X|1|CA|G|1184

Current chains

Chain CA
16S rRNA

Nearby chains

Chain CB
30S ribosomal protein S2
Chain CG
30S ribosomal protein S7
Chain CI
30S ribosomal protein S9
Chain CJ
30S ribosomal protein S10
Chain CN
30S ribosomal protein S14

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1363 s