IL_4V7Y_187

3D structure

PDB id

4V7Y (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UG*UGA

Length

5 nucleotides

Bulged bases

4V7Y|1|CA|G|388

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7Y_187 not in the Motif Atlas

Geometric match to IL_4LFB_016

Geometric discrepancy: 0.1071

The information below is about IL_4LFB_016

Detailed Annotation

Single bulged G

Broad Annotation

No text annotation

Motif group

IL_00225.13

Basepair signature

cWW-L-cWW

Number of instances in this motif group

49

Unit IDs

4V7Y|1|CA|U|375
4V7Y|1|CA|G|376
*
4V7Y|1|CA|U|387
4V7Y|1|CA|G|388
4V7Y|1|CA|A|389

Current chains

Chain CA

16S rRNA

Nearby chains

Chain CP

30S ribosomal protein S16