IL_4V7Y_341
3D structure
- PDB id
- 4V7Y (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the Thermus thermophilus 70S ribosome complexed with azithromycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGG*CCCG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V7Y_341 not in the Motif Atlas
- Geometric match to IL_5TBW_056
- Geometric discrepancy: 0.3808
- The information below is about IL_5TBW_056
- Detailed Annotation
- Major groove platform with extra cWW
- Broad Annotation
- No text annotation
- Motif group
- IL_63959.1
- Basepair signature
- cWW-cSH-cWW-cWW
- Number of instances in this motif group
- 18
Unit IDs
4V7Y|1|AA|C|656
4V7Y|1|AA|G|657
4V7Y|1|AA|G|658
*
4V7Y|1|AA|C|747
4V7Y|1|AA|C|748
4V7Y|1|AA|C|749
4V7Y|1|AA|G|750
Current chains
- Chain AA
- 16S rRNA
Nearby chains
- Chain AH
- 30S ribosomal protein S8
- Chain AO
- 30S ribosomal protein S15
Coloring options: