3D structure

PDB id
4V7Z (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
UGG*CUG
Length
6 nucleotides
Bulged bases
None detected
QA status
Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V7Z_217 not in the Motif Atlas
Geometric match to IL_2ZKO_001
Geometric discrepancy: 0.2187
The information below is about IL_2ZKO_001
Detailed Annotation
Isolated non-canonical cWW pair
Broad Annotation
No text annotation
Motif group
IL_01003.1
Basepair signature
cWW-cWW-cWW
Number of instances in this motif group
174

Unit IDs

4V7Z|1|CA|U|835
4V7Z|1|CA|G|836
4V7Z|1|CA|G|837
*
4V7Z|1|CA|C|849
4V7Z|1|CA|U|850
4V7Z|1|CA|G|851

Current chains

Chain CA
16S rRNA

Nearby chains

Chain CB
30S ribosomal protein S2
Chain CF
30S ribosomal protein S6
Chain CR
30S ribosomal protein S18

Coloring options:


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