IL_4V7Z_324

3D structure

PDB id

4V7Z (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the Thermus thermophilus 70S ribosome complexed with telithromycin.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UUGG*CUGG

Length

8 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V7Z_324 not in the Motif Atlas

Geometric match to IL_4EYA_008

Geometric discrepancy: 0.3424

The information below is about IL_4EYA_008

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_15225.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

33

Unit IDs

4V7Z|1|DA|U|2098
4V7Z|1|DA|U|2099
4V7Z|1|DA|G|2100
4V7Z|1|DA|G|2101
*
4V7Z|1|DA|C|2188
4V7Z|1|DA|U|2189
4V7Z|1|DA|G|2190
4V7Z|1|DA|G|2191

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain CK

30S ribosomal protein S11

Chain DI

50S ribosomal protein L9