IL_4V80_264
3D structure
- PDB id
- 4V80 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the E. coli ribosome bound to CEM-101.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- UGAAG*UGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V80_264 not in the Motif Atlas
- Geometric match to IL_4WF9_024
- Geometric discrepancy: 0.1053
- The information below is about IL_4WF9_024
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
4V80|1|DA|U|703
4V80|1|DA|G|704
4V80|1|DA|A|705
4V80|1|DA|A|706
4V80|1|DA|G|707
*
4V80|1|DA|U|724
4V80|1|DA|G|725
4V80|1|DA|G|726
4V80|1|DA|A|727
4V80|1|DA|G|728
Current chains
- Chain DA
- 23S rRNA
Nearby chains
- Chain DC
- 50S ribosomal protein L2
Coloring options: