IL_4V84_117
3D structure
- PDB id
- 4V84 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of a complex containing domain 3 of CrPV IGR IRES RNA bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUAAGUG*CUUAG*G
- Length
- 13 nucleotides
- Bulged bases
- 4V84|1|BA|U|1142, 4V84|1|BA|A|1143
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V84|1|BA|C|1018
4V84|1|BA|U|1019
4V84|1|BA|A|1020
4V84|1|BA|A|1021
4V84|1|BA|G|1022
4V84|1|BA|U|1023
4V84|1|BA|G|1024
*
4V84|1|BA|C|1140
4V84|1|BA|U|1141
4V84|1|BA|U|1142
4V84|1|BA|A|1143
4V84|1|BA|G|1144
*
4V84|1|BA|G|1144
Current chains
- Chain BA
- 23S ribosomal RNA
Nearby chains
- Chain BB
- 5S ribosomal RNA; 5S rRNA
- Chain BG
- 50S ribosomal protein L6
- Chain BJ
- 50S ribosomal protein L13
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