3D structure

PDB id
4V85 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
Experimental method
X-RAY DIFFRACTION
Resolution
3.2 Å

Loop

Sequence
UAAC*GAG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
IL_4V85_070 not in the Motif Atlas
Geometric match to IL_5J7L_065
Geometric discrepancy: 0.1534
The information below is about IL_5J7L_065
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
IL_31531.3
Basepair signature
cWW-L-R-L-cWW
Number of instances in this motif group
13

Unit IDs

4V85|1|AA|U|1445
4V85|1|AA|A|1446
4V85|1|AA|A|1447
4V85|1|AA|C|1448
*
4V85|1|AA|G|1455
4V85|1|AA|A|1456
4V85|1|AA|G|1457

Current chains

Chain AA
16S rRNA

Nearby chains

Chain AT
30S ribosomal protein S20

Coloring options:


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