IL_4V85_144

3D structure

PDB id

4V85 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UUAG*CGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V85_144 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.161

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

4V85|1|BA|U|1864
4V85|1|BA|U|1865
4V85|1|BA|A|1866
4V85|1|BA|G|1867
*
4V85|1|BA|C|1874
4V85|1|BA|G|1875
4V85|1|BA|A|1876
4V85|1|BA|A|1877
4V85|1|BA|G|1878

Current chains

Chain BA

23S rRNA

Nearby chains