IL_4V85_177
3D structure
- PDB id
- 4V85 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGUG*CUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V85_177 not in the Motif Atlas
- Homologous match to IL_5J7L_353
- Geometric discrepancy: 0.0962
- The information below is about IL_5J7L_353
- Detailed Annotation
- Multiple bulged bases with non-canonical cWW
- Broad Annotation
- Multiple bulged bases with non-canonical cWW
- Motif group
- IL_64231.5
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
4V85|1|BA|G|2843
4V85|1|BA|G|2844
4V85|1|BA|U|2845
4V85|1|BA|G|2846
*
4V85|1|BA|C|2870
4V85|1|BA|U|2871
4V85|1|BA|A|2872
4V85|1|BA|A|2873
4V85|1|BA|C|2874
Current chains
- Chain BA
- 23S rRNA
Nearby chains
- Chain BD
- 50S ribosomal protein L3
- Chain BR
- 50S ribosomal protein L17
- Chain BT
- 50S ribosomal protein L19
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