IL_4V87_378

3D structure

PDB id

4V87 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

GGGGGC*GCCUACC

Length

13 nucleotides

Bulged bases

4V87|1|DA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V87|1|DA|G|879
4V87|1|DA|G|880
4V87|1|DA|G|881
4V87|1|DA|G|882
4V87|1|DA|G|883
4V87|1|DA|C|884
*
4V87|1|DA|G|892
4V87|1|DA|C|893
4V87|1|DA|C|894
4V87|1|DA|U|895
4V87|1|DA|A|896
4V87|1|DA|C|897
4V87|1|DA|C|898

Current chains

Chain DA

RNA (2909-MER)

Nearby chains

Chain CB

Transfer RNA; tRNA

Chain DP

50S ribosomal protein L16

Chain DV

50S ribosomal protein L25