IL_4V88_176

3D structure

PDB id

4V88 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GCCGGUC*GGAUUUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V88|1|A2|G|652
4V88|1|A2|C|653
4V88|1|A2|C|654
4V88|1|A2|G|655
4V88|1|A2|G|656
4V88|1|A2|U|657
4V88|1|A2|C|658
*
4V88|1|A2|G|676
4V88|1|A2|G|677
4V88|1|A2|A|678
4V88|1|A2|U|679
4V88|1|A2|U|680
4V88|1|A2|U|681
4V88|1|A2|C|682

Current chains

Chain A2

18S RIBOSOMAL RNA

Nearby chains

Chain AJ

40S ribosomal protein S9-A