IL_4V88_202

3D structure

PDB id

4V88 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AUUG*CUUGAU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V88|1|A2|A|1230
4V88|1|A2|U|1231
4V88|1|A2|U|1232
4V88|1|A2|G|1233
*
4V88|1|A2|C|1252
4V88|1|A2|U|1253
4V88|1|A2|U|1254
4V88|1|A2|G|1255
4V88|1|A2|A|1256
4V88|1|A2|U|1257

Current chains

Chain A2

18S RIBOSOMAL RNA

Nearby chains

Chain AK

40S ribosomal protein S10-A

Chain AM

40S ribosomal protein S12

Chain Ad

40S ribosomal protein S29-A

Chain Af

40S ribosomal protein S31