IL_4V88_246
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUGAACUU*AUCAAUAAG
- Length
- 17 nucleotides
- Bulged bases
- 4V88|1|A5|A|49
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_40006.1
- Basepair signature
- cWW-L-R-tSH-tHW-tHH-L-R-cWW-cWW
- Number of instances in this motif group
- 6
Unit IDs
4V88|1|A5|C|31
4V88|1|A5|U|32
4V88|1|A5|G|33
4V88|1|A5|A|34
4V88|1|A5|A|35
4V88|1|A5|C|36
4V88|1|A5|U|37
4V88|1|A5|U|38
*
4V88|1|A5|A|45
4V88|1|A5|U|46
4V88|1|A5|C|47
4V88|1|A5|A|48
4V88|1|A5|A|49
4V88|1|A5|U|50
4V88|1|A5|A|51
4V88|1|A5|A|52
4V88|1|A5|G|53
Current chains
- Chain A5
- 25S rRNA
Nearby chains
- Chain DL
- 60S ribosomal protein L13-A
- Chain DN
- 60S ribosomal protein L15-A
- Chain Da
- 60S ribosomal protein L28
- Chain Dj
- 60S ribosomal protein L37-A
- Chain Do
- 60S ribosomal protein L42-A
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