IL_4V88_247
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CUUAGUAA*UGAAGCG
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_35536.1
- Basepair signature
- cWW-tSH-tSW-tHH-cSH-tWH-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
4V88|1|A5|C|82
4V88|1|A5|U|83
4V88|1|A5|U|84
4V88|1|A5|A|85
4V88|1|A5|G|86
4V88|1|A5|U|87
4V88|1|A5|A|88
4V88|1|A5|A|89
*
4V88|1|A5|U|97
4V88|1|A5|G|98
4V88|1|A5|A|99
4V88|1|A5|A|100
4V88|1|A5|G|101
4V88|1|A5|C|102
4V88|1|A5|G|103
Current chains
- Chain A5
- 25S rRNA
Nearby chains
- Chain DL
- 60S ribosomal protein L13-A
- Chain DN
- 60S ribosomal protein L15-A
- Chain DQ
- 60S ribosomal protein L18-A
- Chain Da
- 60S ribosomal protein L28
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