IL_4V88_257
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUGAAAU*ACGGAUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_94167.1
- Basepair signature
- cWW-L-R-tSH-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 11
Unit IDs
4V88|1|A5|G|404
4V88|1|A5|U|405
4V88|1|A5|G|406
4V88|1|A5|A|407
4V88|1|A5|A|408
4V88|1|A5|A|409
4V88|1|A5|U|410
*
4V88|1|A8|A|13
4V88|1|A8|C|14
4V88|1|A8|G|15
4V88|1|A8|G|16
4V88|1|A8|A|17
4V88|1|A8|U|18
4V88|1|A8|C|19
Current chains
- Chain A5
- 25S rRNA
- Chain A8
- 5.8S rRNA
Nearby chains
- Chain DC
- 60S ribosomal protein L4-A
- Chain DP
- 60S ribosomal protein L17-A
- Chain De
- 60S ribosomal protein L32
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