IL_4V88_282

3D structure

PDB id

4V88 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

AA*UUU

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_47827.1

Basepair signature

cWW-cSH-tHS-cWW

Number of instances in this motif group

86

Unit IDs

4V88|1|A5|A|997
4V88|1|A5|A|998
*
4V88|1|A5|U|1050
4V88|1|A5|U|1051
4V88|1|A5|U|1052

Current chains

Chain A5

25S rRNA

Nearby chains

Chain A7

5S ribosomal RNA; 5S rRNA

Chain DD

60S ribosomal protein L5

Chain DI

60S ribosomal protein L10

Chain DT

60S ribosomal protein L21-A