IL_4V88_288

3D structure

PDB id

4V88 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GGG*CUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_62295.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

400

Unit IDs

4V88|1|A5|G|1018
4V88|1|A5|G|1019
4V88|1|A5|G|1020
*
4V88|1|A5|C|1032
4V88|1|A5|U|1033
4V88|1|A5|U|1034

Current chains

Chain A5

25S rRNA

Nearby chains

Chain Ch

Suppressor protein STM1

Chain DI

60S ribosomal protein L10