IL_4V88_331
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- CGAUGG*UGUUGACG
- Length
- 14 nucleotides
- Bulged bases
- 4V88|1|A5|U|2159, 4V88|1|A5|U|2175, 4V88|1|A5|C|2179
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73044.1
- Basepair signature
- cWW-R-tSS-tWW-tWW-cWW
- Number of instances in this motif group
- 7
Unit IDs
4V88|1|A5|C|2156
4V88|1|A5|G|2157
4V88|1|A5|A|2158
4V88|1|A5|U|2159
4V88|1|A5|G|2160
4V88|1|A5|G|2161
*
4V88|1|A5|U|2173
4V88|1|A5|G|2174
4V88|1|A5|U|2175
4V88|1|A5|U|2176
4V88|1|A5|G|2177
4V88|1|A5|A|2178
4V88|1|A5|C|2179
4V88|1|A5|G|2180
Current chains
- Chain A5
- 25S rRNA
Nearby chains
- Chain A6
- Small subunit ribosomal RNA; SSU rRNA
- Chain DA
- 60S ribosomal protein L2-A
- Chain Dp
- 60S ribosomal protein L43-A
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