IL_4V88_368

3D structure

PDB id

4V88 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the eukaryotic ribosome at 3.0 A resolution.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CCACAC*GCGUGG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_54301.1

Basepair signature

cWW-cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

12

Unit IDs

4V88|1|A5|C|3161
4V88|1|A5|C|3162
4V88|1|A5|A|3163
4V88|1|A5|C|3164
4V88|1|A5|A|3165
4V88|1|A5|C|3166
*
4V88|1|A5|G|3284
4V88|1|A5|C|3285
4V88|1|A5|G|3286
4V88|1|A5|U|3287
4V88|1|A5|G|3288
4V88|1|A5|G|3289

Current chains

Chain A5

25S rRNA

Nearby chains