IL_4V88_394
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 4V88|1|A6|U|170
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.3
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-L-R-cWW
- Number of instances in this motif group
- 4
Unit IDs
4V88|1|A6|G|143
4V88|1|A6|U|144
4V88|1|A6|A|145
4V88|1|A6|U|146
4V88|1|A6|A|147
4V88|1|A6|A|148
4V88|1|A6|C|149
*
4V88|1|A6|G|165
4V88|1|A6|C|166
4V88|1|A6|U|167
4V88|1|A6|A|168
4V88|1|A6|A|169
4V88|1|A6|U|170
4V88|1|A6|A|171
4V88|1|A6|C|172
Current chains
- Chain A6
- 18S rRNA
Nearby chains
- Chain CG
- 40S ribosomal protein S6-A
- Chain CY
- 40S ribosomal protein S24-A
- Chain DW
- 60S ribosomal protein L24-A
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