IL_4V88_447
3D structure
- PDB id
- 4V88 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the eukaryotic ribosome at 3.0 A resolution.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- AUAAGGAUUG*CUUGAUUU
- Length
- 18 nucleotides
- Bulged bases
- 4V88|1|A6|G|1228
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_34780.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V88|1|A6|A|1224
4V88|1|A6|U|1225
4V88|1|A6|A|1226
4V88|1|A6|A|1227
4V88|1|A6|G|1228
4V88|1|A6|G|1229
4V88|1|A6|A|1230
4V88|1|A6|U|1231
4V88|1|A6|U|1232
4V88|1|A6|G|1233
*
4V88|1|A6|C|1252
4V88|1|A6|U|1253
4V88|1|A6|U|1254
4V88|1|A6|G|1255
4V88|1|A6|A|1256
4V88|1|A6|U|1257
4V88|1|A6|U|1258
4V88|1|A6|U|1259
Current chains
- Chain A6
- 18S rRNA
Nearby chains
- Chain CK
- 40S ribosomal protein S10-A
- Chain CM
- 40S ribosomal protein S12
- Chain Cd
- 40S ribosomal protein S29-A
- Chain Cf
- 40S ribosomal protein S31
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