IL_4V89_047

3D structure

PDB id

4V89 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of Release Factor RF3 Trapped in the GTP State on a Rotated Conformation of the Ribosome (without viomycin)

Experimental method

X-RAY DIFFRACTION

Resolution

3.7 Å

Loop

Sequence

GUG*CC

Length

5 nucleotides

Bulged bases

4V89|1|AA|U|1049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V89_047 not in the Motif Atlas

Homologous match to IL_6CZR_152

Geometric discrepancy: 0.1547

The information below is about IL_6CZR_152

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V89|1|AA|G|1048
4V89|1|AA|U|1049
4V89|1|AA|G|1050
*
4V89|1|AA|C|1208
4V89|1|AA|C|1209

Current chains

Chain AA

16S rRNA

Nearby chains

Chain AN

30S ribosomal protein S14