IL_4V8A_327
3D structure
- PDB id
- 4V8A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of thermorubin in complex with the 70S ribosome from Thermus thermophilus.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAACC*GGGUGCCCCGCGAGGGGAGCC
- Length
- 27 nucleotides
- Bulged bases
- 4V8A|1|DA|C|1030|||B
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
4V8A|1|DA|G|1002
4V8A|1|DA|G|1003
4V8A|1|DA|A|1004
4V8A|1|DA|A|1005
4V8A|1|DA|C|1006
4V8A|1|DA|C|1007
*
4V8A|1|DA|G|1022
4V8A|1|DA|G|1023
4V8A|1|DA|G|1024
4V8A|1|DA|U|1025
4V8A|1|DA|G|1026
4V8A|1|DA|C|1027
4V8A|1|DA|C|1028
4V8A|1|DA|C|1029
4V8A|1|DA|C|1030
4V8A|1|DA|G|1030|||A
4V8A|1|DA|C|1030|||B
4V8A|1|DA|G|1030|||C
4V8A|1|DA|A|1030|||D
4V8A|1|DA|G|1031
4V8A|1|DA|G|1032
4V8A|1|DA|G|1033
4V8A|1|DA|G|1034
4V8A|1|DA|A|1035
4V8A|1|DA|G|1036
4V8A|1|DA|C|1037
4V8A|1|DA|C|1038
Current chains
- Chain DA
- 16S ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: