IL_4V8B_385

3D structure

PDB id

4V8B (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex).

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UG*CAACAAG

Length

9 nucleotides

Bulged bases

4V8B|1|BA|A|1510

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8B_385 not in the Motif Atlas

Homologous match to IL_9DFE_060

Geometric discrepancy: 0.316

The information below is about IL_9DFE_060

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_46086.1

Basepair signature

cWW-L-cWW-L-L-R

Number of instances in this motif group

1

Unit IDs

4V8B|1|BA|U|1482
4V8B|1|BA|G|1483
*
4V8B|1|BA|C|1506
4V8B|1|BA|A|1507
4V8B|1|BA|A|1508
4V8B|1|BA|C|1509
4V8B|1|BA|A|1510
4V8B|1|BA|A|1511
4V8B|1|BA|G|1512

Current chains

Chain BA

RNA (2912-MER)

Nearby chains