IL_4V8C_034

3D structure

PDB id

4V8C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GG*UAC

Length

5 nucleotides

Bulged bases

4V8C|1|AA|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8C|1|AA|G|880
4V8C|1|AA|G|881
*
4V8C|1|AA|U|895
4V8C|1|AA|A|896
4V8C|1|AA|C|897

Current chains

Chain AA

RNA (2912-MER)

Nearby chains

Chain AV

50S ribosomal protein L25

Chain CB

TRNA-LEU