IL_4V8C_285

3D structure

PDB id

4V8C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

CUGCC*GGAGGAAG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8C|1|CA|C|1158
4V8C|1|CA|U|1159
4V8C|1|CA|G|1160
4V8C|1|CA|C|1161
4V8C|1|CA|C|1162
*
4V8C|1|CA|G|1174
4V8C|1|CA|G|1175
4V8C|1|CA|A|1176
4V8C|1|CA|G|1177
4V8C|1|CA|G|1178
4V8C|1|CA|A|1179
4V8C|1|CA|A|1180
4V8C|1|CA|G|1181

Current chains

Chain CA

16S ribosomal RNA

Nearby chains

Chain CE

30S RIBOSOMAL PROTEIN S2

Chain CL

30S RIBOSOMAL PROTEIN S9