IL_4V8D_104
3D structure
- PDB id
- 4V8D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure analysis of ribosomal decoding (cognate tRNA-tyr complex).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUC*GC
- Length
- 5 nucleotides
- Bulged bases
- 4V8D|1|BA|U|1012
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8D_104 not in the Motif Atlas
- Homologous match to IL_7RQB_038
- Geometric discrepancy: 0.0793
- The information below is about IL_7RQB_038
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_83039.16
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 116
Unit IDs
4V8D|1|BA|G|1011
4V8D|1|BA|U|1012
4V8D|1|BA|C|1013
*
4V8D|1|BA|G|1149
4V8D|1|BA|C|1150
Current chains
- Chain BA
- RNA (2912-MER)
Nearby chains
- Chain B1
- 50S ribosomal protein L20
- Chain BM
- 50S ribosomal protein L13
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