IL_4V8F_027
3D structure
- PDB id
- 4V8F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUGAC*GGUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8F_027 not in the Motif Atlas
- Homologous match to IL_7RQB_026
- Geometric discrepancy: 0.0992
- The information below is about IL_7RQB_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_94165.1
- Basepair signature
- cWW-L-R-L-tHS-cWW
- Number of instances in this motif group
- 1
Unit IDs
4V8F|1|AA|C|846
4V8F|1|AA|U|847
4V8F|1|AA|G|848
4V8F|1|AA|A|849
4V8F|1|AA|C|850
*
4V8F|1|AA|G|928
4V8F|1|AA|G|929
4V8F|1|AA|U|930
4V8F|1|AA|G|931
Current chains
- Chain AA
- RNA (2912-MER)
Nearby chains
- Chain AX
- 50S ribosomal protein L30
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