IL_4V8F_083
3D structure
- PDB id
- 4V8F (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.3 Å
Loop
- Sequence
- CUG*UUG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8F_083 not in the Motif Atlas
- Homologous match to IL_7RQB_083
- Geometric discrepancy: 0.0928
- The information below is about IL_7RQB_083
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_86319.2
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 270
Unit IDs
4V8F|1|AA|C|2085
4V8F|1|AA|U|2086
4V8F|1|AA|G|2087
*
4V8F|1|AA|U|2232
4V8F|1|AA|U|2233
4V8F|1|AA|G|2234
Current chains
- Chain AA
- RNA (2912-MER)
Nearby chains
- Chain AD
- 50S ribosomal protein L2
- Chain AZ
- 50S ribosomal protein L28
- Chain BD
- TRNA-TYR
Coloring options: