IL_4V8F_091

3D structure

PDB id

4V8F (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-ttyr complex with paromomycin).

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUCC*GGC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4V8F|1|AA|G|2400
4V8F|1|AA|U|2401
4V8F|1|AA|C|2402
4V8F|1|AA|C|2403
*
4V8F|1|AA|G|2414
4V8F|1|AA|G|2415
4V8F|1|AA|C|2416

Current chains

Chain AA

RNA (2912-MER)

Nearby chains

Chain A6

50S ribosomal protein L33

Chain A8

50S ribosomal protein L35

Chain AO

50S ribosomal protein L15

Chain AZ

50S ribosomal protein L28