IL_4V8G_047

3D structure

PDB id

4V8G (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of RMF bound to the 70S ribosome.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UGCAU*AUG

Length

8 nucleotides

Bulged bases

4V8G|1|AA|C|1054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_4V8G_047 not in the Motif Atlas

Geometric match to IL_6CZR_154

Geometric discrepancy: 0.2237

The information below is about IL_6CZR_154

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_76319.4

Basepair signature

cWW-L-R-L-cWW

Number of instances in this motif group

4

Unit IDs

4V8G|1|AA|U|1052
4V8G|1|AA|G|1053
4V8G|1|AA|C|1054
4V8G|1|AA|A|1055
4V8G|1|AA|U|1056
*
4V8G|1|AA|A|1204
4V8G|1|AA|U|1205
4V8G|1|AA|G|1206

Current chains

Chain AA

16S Ribosomal RNA

Nearby chains

Chain AC

30S Ribosomal Protein S3

Chain AN

30S Ribosomal Protein S14