IL_4V8G_358
3D structure
- PDB id
- 4V8G (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of RMF bound to the 70S ribosome.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3 Å
Loop
- Sequence
- GUUCCC*GAACAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_4V8G_358 not in the Motif Atlas
- Homologous match to IL_7A0S_105
- Geometric discrepancy: 0.4039
- The information below is about IL_7A0S_105
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_93630.2
- Basepair signature
- cWW-L-R-L-cWW-L-L
- Number of instances in this motif group
- 4
Unit IDs
4V8G|1|DB|G|33
4V8G|1|DB|U|34
4V8G|1|DB|U|35
4V8G|1|DB|C|36
4V8G|1|DB|C|37
4V8G|1|DB|C|38
*
4V8G|1|DB|G|44
4V8G|1|DB|A|45
4V8G|1|DB|A|46
4V8G|1|DB|C|47
4V8G|1|DB|A|48
4V8G|1|DB|C|49
Current chains
- Chain DB
- 5S Ribosomal RNA
Nearby chains
- Chain D4
- 50S Ribosomal Protein L31
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DG
- 50S Ribosomal Protein L5
- Chain DS
- 50S Ribosomal Protein L18
Coloring options: